FISS

If you haven't already installed Python with miniforge(Mamba), we recommend (re-)installing Python with miniforge. The miniforge will install conda and automatically configure the default channel to be conda-forge, and it is more stable and faster than the original conda.

First, download the installer for your OS from here. Then install the launch file like below:

Run the downloaded script with bash.

$ bash Miniforge3-Linux-x86_64.sh

Please install the miniforge in the default path. Download this and copy it to the home directroy.

$ cp ~/Downloads/initmamba ~/.initmamba

Open the ~/.bashrc and add the alias to source the .initmamba like below:

alias runmamba="source $HOME/.initmamba"

If you have conda initialization in the .bashrc copy the initialization to ~/.initconda and comment out those lines. Then add the alias runconda like above. Save the .bashrc and open a new terminal. Run the miniforge using the new command.

$ runmamba

Then, you can use the conda and mamba commands.

Run the downloaded script with zsh.

$ zsh Miniforge3-MacOSX-arm_64.sh

Please install the miniforge in the default path. Download this and copy it to the home directroy.

$ cp ~/Downloads/initmamba ~/.initmamba

Open the ~/.zshrc and add the alias to source the .initmamba like below:

alias runmamba="source $HOME/.initmamba"

If you have conda initialization in the .bashrc copy the initialization to ~/.initconda and comment out those lines. Then add the alias runconda like above. Save the .zshrc and open a new terminal. Run the miniforge using the above new command.

$ runmamba

Then, you can use the conda and mamba commands.

Run the miniforge executable file downloaded from the link above.
After installation, you should have a new "miniforge Prompt" in your start menu.

To avoid the conflict, we recommend using a new virtual environment to install FISSpy. First, launch a terminal (under a UNIX-like system) or the miniforge Prompt (under Windows). Then create and activate a new virtual environment:

$ mamba create -n yourenvname
$ conda config --add channels conda-forge
$ conda config --set channel_priority strict
$ mamba activate yourenvname

Here 'mamba' can be relaced to the conda. You can freely change 'yourenvname' to a different environment name.

Now we cal install fisspy:

$ mamba install fisspy

This will install FISSpy and all dependencies. You can also install other packages, such as Spyder, running mamba install <package_name>.

If you fail to download the FISSpy using the above options, you can download the package using the PyPI server, but we do not recommend this method because of the code dependency.

> pip install fisspy

To update the package, you first check the available version of the FISSpy by running:

> mamba search fisspy

Then, update or install a specific version of the FISSpy

> mamba update fisspy

> mamba install fisspy=x.x.x

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Fast Imaging Solar Spectrograph

Installation

Install Python Using miniforge.

Setting the environment

Option 1) Using Mamba

Option 3) Using PyPI

Updating FISSpy